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Konu "Protein folding." için M.S. Theses listeleme

Konu "Protein folding." için M.S. Theses listeleme

Sırala: Sıra: Sonuçlar:

  • Analysis of cracking phenomena along conformational transition pathways of proteins 
    Meriçer, Çağlar. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2012., 2012.)
    The weighted ensemble (WE) methodology was incorporated into an iterative ANM-MC (Anisotropic network model- Monte Carlo) simulation algorithm, which has been developed to generating targeted conformational transition ...
  • Identification of native conformations of proteins using a low resolution model 
    Özkan, Ş. Banu. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Sciences and Engineering, 1997., 1997.)
    Exhaustive enumeration is performed by using a low resolution model. The secondary structure elements of the proteins are kept as rigid blocks. Large ensembles of decoy structures are generated by rotating the virtual ...
  • Packing regularities in folded proteins 
    Bağcı, Elife Zerrin. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2001., 2001.)
    Using lattice models of proteins is a common method to reduce conformational space. Despite the suitability of various lattice geometries, the optimal packing geometry of residues in folded structures, or the generic ...
  • Prediction of allosteric key residues and their role in protein folding 
    Ekesan, Şölen. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2009., 2009.)
    Allostery, an aspect of protein dynamics, is crucial in regulation of protein activity. It is believed that allostery is maintained through communication pathways of key residues residing within distant allosteric sites. ...
  • Simulation of protein structure by a simplified model: |application to the rop dimer 
    Akten, E. Demet. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 1996., 1996.)
    In this thesis, the estimation of the native three-dimensional structure of a dimeric protein, Rop, from its amino-acid sequence is performed. Rop is a small RNA-binding protein that is coded by certain plasmids and is ...

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