Browsing M.S. Theses by Title

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  • Bacterial uptake mechanism of peptides investigated by steered molecular dynamics simulations 
    Akdağ, İhsan Ömür. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2011., 2011.)
    β-lactam antibiotics provide defense against bacterial infections, but the misuse of antibiotics has led to the emergence of bacteria with immunity. One of the major mechanisms of this immunity is bacterial production of ...
  • Base station location and terminal assignment problem in WiMAX networks 
    Hanoğlu, Vahit. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2011., 2011.)
    Although the base station location and terminal assignment problem in cellular networks has been extensively studied, the previous work in the literature cannot be directly applied to wireless networks that support multiple ...
  • Bayesian methods for real-time pitch tracking 
    Şimşekli, Umut. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2010., 2010.)
    In this thesis, we deal with probabilistic methods to track the pitch of a musical instrument in real-time. Here, we take the pitch as a physical attribute of a musical sound which is closely related to the frequency ...
  • Bayesian model selection for latent variable causal networks by sequential Monte Carlo 
    Kurutmaz, Mehmet Burak. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2019., 2019.)
    Inferring the causal structure of several random variables is a challenging task when interventions are not feasible. Presence of latent confounders further increases the difficulty of the problem, and therefore is neglected ...
  • Bayesian network based pathway analysis of high throughput biological data 
    Korucuoğlu, Melike. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2013., 2013.)
    Biological data production has been increasing at an unprecedented pace with the advancements of microarrays and next-generation sequencing technologies. Such High Throughput Biological Data (HTBD), requires detailed ...
  • Better methods for configuring case-based reasoning systems 
    Kocagüneli, Ekrem. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2010., 2010.)
    Software effort estimation has been one of the major challenges in software engineering and previous research has mainly focused on addressing the large deviation problem in estimations by improving prediction accuracies ...
  • Biclustering using nonparametric Bayesian methods 
    Çelik, Safiye. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2012., 2012.)
    Multiway clustering is a popular analysis method due to its several potential applications. Various techniques have been developed to cluster di erent entities of a data matrix simultaneously by taking relational entries ...
  • Bidirectional multi-step prediction with affordances 
    Bozdoğan, Utku. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2022., 2022)
    Affordances are action possibilities of an object, directly perceived by agents based on their capabilities. Affordances are learned from goal-free exploration of the agent’s capabilities through observing the effects of ...
  • Bidirectional scheduling for Wi-Fi 6 (IEEE (802.11ax) networks 
    Dilmaç, Abdurrahman. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2022., 2022)
    In recent years, Wi-Fi, along with Broadband Wireless, has been at the center of wireless communication. End-users owning laptops, tablets, and mobile phones enjoyed connected mobility. This massive adaptation brought more ...
  • Biometric identification through hand vein patterns 
    Yüksel, Aycan. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2010., 2010.)
    Many biometric systems, such as face, fingerprint and iris have been studied extensively for personal verification and identification purposes. Biometric identification with vein patterns is a more recent approach that ...
  • Biomolecular language processing for drug-target affinity prediction 
    Özçelik, Rıza. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2022., 2022)
    Finding high-affinity protein-chemical pairs is a prominent stage of the drug discovery pipeline. However, the number of available proteins and chemicals forms an experimentally insurmountable combination space and ...
  • Blind docking simulations of benzothiazoles on triosephosphate isomerase 
    Ural, Gülgün. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2011., 2011.)
    Selective inhibition of the activity of the glycolytic enzyme triosephosphate isomerase from Trypanosoma cruzi (TcTIM) as opposed to human TIM (hTIM) has been critical for drug design studies on Chagas disease. The aim of ...
  • Blind spots of qualitative simulators 
    Taşdemir, Nuri. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2007., 2007.)
    Qualitative simulators are important tools for analyzing the possible behaviors of a dynamical system. The technique of qualitative simulation has some theoretical limitations. For some input system models, a qualitative ...
  • Blur assessment in sign language videos 
    Eryılmaz, Giray Naim. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2022., 2022)
    Blur impairs the sharpness of visual features and the clarity of details. It may sometimes be desired for artistic effect. However, in general, it is regarded as a defect. There are different problems studied about blur, ...
  • Build.net: a graphical application generator for object-oriented software and sample applications 
    Gönen, Mehmet. (Thesis (M.S)-Bogazici University.Institute for Graduate Studies in Science and Engineering, 2005., 2005.)
    Existing application and code generators are designed for domain-specific tasks. They are used in the intermediate steps of software development process and are notintended to develop full scale applications. BUILD.NET ...
  • CAREACT: an adaptive and context aware framework for anomaly detection in ambient assisted living 
    Özen, Mustafa Ozan. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2013., 2013.)
    In this thesis, we analyzed current trends and challenges in ambient assisted living environments and deduced that there is a need for a monitoring system that incorporates existing telemonitoring concepts to activities ...
  • Categorized storage structure design and skyline indexing for XML-based product catalogs 
    Kolçak, Ömer Can. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2008., 2008.)
    One of the most important components of e-commerce business is electronic product catalog. In order to provide higher customer satisfaction, the accessibility of products or product groups should be quick and easy. The ...
  • Channel selection algorithm for software defined radio based cognitive radios 
    Zümbül, Adem. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2009., 2009.)
    Radio spectrum is a finite resource and effective utilization of it in wireless networks is a key challenge as the number of users increase. Current wireless networks are expected to fail to satisfy increasing user demands ...
  • Classification based cost estimation model for embedded software 
    Bakır, Ayşe. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2008., 2008.)
    Software development companies face many problems in order to complete their projects successfully: on time, within budget and with no defects. Scheduling and resource allocation directly affect financial performance and ...
  • Classifier performances for credit risk analysis 
    Çetiner, Erkan. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2011., 2011.)
    Credit Risk Analysis (CRA) is an important and challenging data mining problem in financial analysis domain which is commonly used by many financial organizations. It became one of the most important and hot concept in ...

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