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Browsing Kimya Mühendisliği by Author "Uyar, Arzu."

Browsing Kimya Mühendisliği by Author "Uyar, Arzu."

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  • Conformational transitions of proteins using multi-scale modeling approaches 
    Uyar, Arzu. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2014., 2014.)
    A detailed analysis on a dataset consisting of 30 proteins was performed using a hybrid simulation technique. This iterative technique, named as ANM-MC, generates a targeted pathway between two conformations, where the ...
  • Structure-function relationships of type II restriction endonucleases 
    Uyar, Arzu. (Thesis (M.S.)-Bogazici University. Institute for Graduate Studies in Science and Engineering, 2008., 2008.)
    Restriction endonucleases (REs) constitute an enzyme family, which can recognize and cleave specific foreign DNA sequences to protect prokaryotic cells. The vibrational dynamics of Type II REs are investigated by elastic ...

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