Browsing Bilgisayar Mühendisliği by Subject "Ligand binding (Biochemistry)"

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Analysing drug taggets using ligand similarity

Öztürk, Hakime. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2014., 2014.)

Analysis of the interactions between target proteins and drugs is crucial not only for drug discovery, but also for a better understanding of the possible evolutionary pressure that the drugs exert on the proteins. Based ...
Application of mixed coarse-grained elastic network model to protein-ligand interactions

Tezcan, Nurver. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2014., 2014.)

Ligand binding to an active or allosteric regulatory site of enzyme may lead conformational changes or changes in protein dynamics. The aim of this thesis is to explore the effect of ligand binding on vibrational dynamics ...
Extracting protein-ligand interactions from the biomedical literature using deep learning approaches

Yüksel, Atakan. (Thesis (M.S.) - Bogazici University. Institute for Graduate Studies in Science and Engineering, 2019., 2019.)

Protein-ligand interactions play crucial roles in living organisms, thus they attract many researchers from various disciplines. There are protein-ligand interaction databases that provide information to researchers in a ...

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